This repository contains PyIOmica, a Python package that provides bioinformatics utilities for analyzing (dynamic) omics datasets. PyIOmica extends MathIOmica usage to Python and implements new visualizations and computational tools for graph analyses. The documentation is available at Read the Docs: https://pyiomica.readthedocs.io/en/latest/
To install PyIOmica on any platform you need Python version 3.7 or higher
pip install pyiomica
Alternatively, you can install directly from github using:
pip install git+https://github.com/gmiaslab/pyiomica/
or
git clone https://github.com/gmiaslab/pyiomica/
python setup.py install
After installation you can run:
>>> import pyiomica
Documentation for PyIOmica is built-in and is available through the help() functionality in Python. Also the documentation is available at Read the Docs: https://pyiomica.readthedocs.io/en/latest/
https://github.com/gmiaslab/pyiomica
PyIOmica is released under an MIT License. Please also consult the folder LICENSES distributed with PyIOmica regarding Licensing information for use of external associated content.
PyIOmica development and associated research were supported by the Translational Research Institute for Space Health through NASA Cooperative Agreement NNX16AO69A (Project Number T0412, PI: Mias). The content is solely the responsibility of the authors and does not necessarily represent the official views of the supporting funding agencies.